BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B08LP1|AL428853
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1801 0.0
>3x_Contig1762
Length = 22098
Score = 1801 bits (904), Expect = 0.0
Identities = 921/930 (99%), Gaps = 1/930 (0%)
Strand = Plus / Minus
Query: 1 gatctatactcagtaaaattgaaacaaaaagaaaaacctttccactcacttttaataggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19962 gatctatactcagtaaaattgaaacaaaaagaaaaacctttccactcacttttaataggt 19903
Query: 61 atatctgcsagcaattatatatttatacggcaatcstgaagtaccttgaataccaccttc 120
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19902 atatctgccagcaattatatatttatacggcaatcctgaagtaccttgaataccaccttc 19843
Query: 121 aagataccaatatagtacccaaaaaatgtgtcaagttgaagagaagaaggagaaatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19842 aagataccaatatagtacccaaaaaatgtgtcaagttgaagagaagaaggagaaatatgc 19783
Query: 181 aggtttcgttaaaattgggatctaagtstcttttcttatttacatataaastgccatact 240
||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 19782 aggtttccttaaaattgggatctaagtctcttttcttatttacatataaactgccatact 19723
Query: 241 gtgaaaaaattcaaaaactaaacaatataaacaaaggaaaaaggaaacttccagtcacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19722 gtgaaaaaattcaaaaactaaacaatataaacaaaggaaaaaggaaacttccagtcacca 19663
Query: 301 atacgtgtatgtgttaataaaaggcgtttgtactagtagttgacgagttgaagcgtatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19662 atacgtgtatgtgttaataaaaggcgtttgtactagtagttgacgagttgaagcgtatca 19603
Query: 361 gtggcagaataaaagtgtcacattgttgatagtggcgtcctattttkttcaattatggat 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 19602 gtggcagaataaaagtgtcacattgttgatagtggcgtcctatttttttcaattatggat 19543
Query: 421 tcagagcaggtaaagaaacgaatgtctcaaattgagttagagataagtgagatgaacgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19542 tcagagcaggtaaagaaacgaatgtctcaaattgagttagagataagtgagatgaacgag 19483
Query: 481 atgatagataagaacttgagcattcatgagaccacggttaag-acgaaacaggatgtttc 539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 19482 atgatagataagaacttgagcattcatgagaccacggttaagcacgaaacaggatgtttc 19423
Query: 540 ttctgacgatcaagatgaggattacttagagttgcagaagctaacggcgaaccaggttga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19422 ttctgacgatcaagatgaggattacttagagttgcagaagctaacggcgaaccaggttga 19363
Query: 600 tcaatttgtgcagaatgmtattaaaagcgatggggaggacgaggtaccggaaacactaag 659
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19362 tcaatttgtgcagaatgctattaaaagcgatggggaggacgaggtaccggaaacactaag 19303
Query: 660 tagtggcagagagacggcactacaagcggaagagcgagaagacataaaagaggagaaacc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19302 tagtggcagagagacggcactacaagcggaagagcgagaagacataaaagaggagaaacc 19243
Query: 720 aggtactcaattagaggcagcagtagtggcagaagtggtggcagaagtacaaactgaacc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19242 aggtactcaattagaggcagcagtagtggcagaagtggtggcagaagtacaaactgaacc 19183
Query: 780 aactgctgagaaagctattcccgctgtttccgtaacctctgttccagcgaagagaatacc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19182 aactgctgagaaagctattcccgctgtttccgtaacctctgttccagcgaagagaatacc 19123
Query: 840 ttctgagaagatcgawgtctccaccagcacagaagaggatgaagcagcagcagcagctac 899
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19122 ttctgagaagatcgaagtctccaccagcacagaagaggatgaagcagcagcagcagctac 19063
Query: 900 gattgtacctaacactgataaatcaagtac 929
||||||||||||||||||||||||||||||
Sbjct: 19062 gattgtacctaacactgataaatcaagtac 19033
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7853
Number of Sequences: 1807
Number of extensions: 7853
Number of successful extensions: 195
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)